CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CpipJ_CPIJ010032
(
Culex pipiens
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
CpipJ_CPIJ010032
T07973_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CpipJ_CPIJ010032-RA
CCHC ZF
67
84
KTCYNCKKVGHLAANCPE
Links
Other
CCHC ZF
family RBPs
Other
Culex pipiens
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CPIJ010032
Culex quinquefasciatus
CPIJ010032
N
1.000
XP_001193544.1
Strongylocentrotus purpuratus
XP_001193544.1
N
0.778
XP_001179009.1
Strongylocentrotus purpuratus
XP_001179009.1
N
0.778
184477
Helobdella robusta
184477
N
0.722
174274
Helobdella robusta
174274
N
0.722
MDP0000306612
Malus x domestica
MDP0000306612
N
0.722