XP_001193544.1 (Strongylocentrotus purpuratus)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 XP_001193544.1 T16360_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
XP_001193544.1 CCHC ZF 41 58

Links

Other CCHC ZF family RBPs
Other Strongylocentrotus purpuratus RBPs

16 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XP_001179009.1 Strongylocentrotus purpuratus XP_001179009.1 N 1.000
CpipJ_CPIJ010032 Culex pipiens CpipJ_CPIJ010032 N 0.778
MDP0000306612 Malus x domestica MDP0000306612 N 0.778
CPIJ010032 Culex quinquefasciatus CPIJ010032 N 0.778
GRMZM2G063544 Zea mays GRMZM2G063544 N 0.722
Medtr2g037320 Medicago truncatula Medtr2g037320 N 0.722
LjSGA_011995.1 Lotus japonicus LjSGA_011995.1 N 0.722
GRMZM2G038516 Zea mays GRMZM2G038516 N 0.722
PDK_20s1341991g003 Phoenix dactylifera PDK_20s1341991g003 N 0.722
cassava22294.valid.m1 Manihot esculenta cassava22294.valid.m1 N 0.722
LOC_Os12g37720 Oryza sativa LOC_Os12g37720 N 0.722
BGIOSIBCE036979 Oryza indica BGIOSIBCE036979 N 0.722
B9HIJ8_POPTR Populus trichocarpa POPTR_0008s10060 N 0.722
SB08G018400 Sorghum bicolor Sb08g018400 N 0.722
29889.m003353 Ricinus communis 29889.m003353 N 0.722
Cucsa.135100 Cucumis sativus Cucsa.135100 N 0.722