CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CPSG_03683
(
Coccidioides posadasii
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
CPSG_03683
T08004_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CPSG_03683T0
CCHC ZF
58
74
VCYNCGSPDHFIQHCPE
Links
Other
CCHC ZF
family RBPs
Other
Coccidioides posadasii
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CIMG_09140
Coccidioides immitis
CIMG_09140
N
1.000
UREG_05188
Uncinocarpus reesii
UREG_05188
N
0.722
e_gw1.147.34.1
Physcomitrella patens
e_gw1.147.34.1
N
0.706
e_gw1.84.86.1
Physcomitrella patens
e_gw1.84.86.1
N
0.706