e_gw1.147.34.1 (Physcomitrella patens)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 e_gw1.147.34.1 T13518_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.147.34.1 CCHC ZF 195 211

Links

Other CCHC ZF family RBPs
Other Physcomitrella patens RBPs

41 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw1.84.86.1 Physcomitrella patens e_gw1.84.86.1 N 1.000
e_gw1.0.2594.1 Selaginella moellendorfii e_gw1.0.2594.1 N 0.941
Genemark.8861_g Serpula lacrymans Genemark.8861_g N 0.765
estExt_Genewise1.C_60832 Pleurotus ostreatus estExt_Genewise1.C_60832 N 0.765
e_gw1.311.2.1 Postia placenta e_gw1.311.2.1 N 0.765
AMAG_05802 Allomyces macrogynus AMAG_05802 N 0.765
s_441997 Phytophthora sojae s_441997 N 0.765
CC1G_00892 Coprinopsis cinerea CC1G_00892 N 0.765
e_gw1.135.14.1 Postia placenta e_gw1.135.14.1 N 0.765
UM00321 Ustilago maydis UM00321 N 0.765
PITG_10087 Phytophthora infestans PITG_10087 N 0.765
fgenesh1_pg.C_scaffold_47000011 Phytophthora ramorum fgenesh1_pg.C_scaffold_47000011 N 0.765
AMAG_12234 Allomyces macrogynus AMAG_12234 N 0.765
estExt_fgenesh2_pm.C_60269 Heterobasidion annosum estExt_fgenesh2_pm.C_60269 N 0.765
e_gwh2.3.362.1 Phanerochaete chrysosporium e_gwh2.3.362.1 N 0.765
eu2.Lbscf0002g03430 Laccaria bicolor eu2.Lbscf0002g03430 N 0.765
SJAG_02668 Schizosaccharomyces japonicus SJAG_02668 N 0.706
SPPG_06553 Spizellomyces punctatus SPPG_06553 N 0.706
RO3G_12479 Rhizopus oryzae RO3G_12479 N 0.706
estExt_fgenesh1_pg.C_130086 Sporobolomyces roseus estExt_fgenesh1_pg.C_130086 N 0.706
CPSG_03683 Coccidioides posadasii CPSG_03683 N 0.706
estExtDG_Genemark1.C_1080017 Emiliania huxleyi estExtDG_Genemark1.C_1080017 N 0.706
DDB_G0279003 Dictyostelium discoideum DDB_G0279003 N 0.706
Ein09_0330 Encephalitozoon intestinalis Ein09_0330 N 0.706
ECU09_0340 Encephalitozoon cuniculi ECU09_0340 N 0.706
SPBP8B7.15c Schizosaccharomyces pombe SPBP8B7.15c N 0.706
CIMG_09140 Coccidioides immitis CIMG_09140 N 0.706
e_gw.4.464.1 Branchiostoma floridae e_gw.4.464.1 N 0.706
estExt_fgenesh1_pg.C_90130 Micromonas pusilla estExt_fgenesh1_pg.C_90130 N 0.706
estExt_fgenesh1_pg.C_70305 Cryphonectria parasitica estExt_fgenesh1_pg.C_70305 N 0.706
estExt_fgenesh2_kg.C_60291 Agaricus bisporus estExt_fgenesh2_kg.C_60291 N 0.706
EFA83972.1 Polysphondylium pallidum EFA83972.1 N 0.706
fgenesh1_pg.C_scaffold_4000063 Phytophthora ramorum fgenesh1_pg.C_scaffold_4000063 N 0.706
gw1.4.1338.1 Schizophyllum commune gw1.4.1338.1 N 0.706
estExt_Genewise1Plus.C_1270035 Capitella teleta estExt_Genewise1Plus.C_1270035 N 0.706
fgeneshTM_pm.1_#_792 Tremella mesenterica fgeneshTM_pm.1_#_792 N 0.706
estExt_fgenesh1_pm.C_120018 Mycosphaerella fijiensis estExt_fgenesh1_pm.C_120018 N 0.706
estExt_fgeneshMC_pg.C_60156 Mucor circinelloides estExt_fgeneshMC_pg.C_60156 N 0.706
XP_002162513.1 Hydra magnipapillata XP_002162513.1 N 0.706
estExt_fgeneshTA2_pg.C_20820 Trichoplax adhaerens estExt_fgeneshTA2_pg.C_20820 N 0.706
fgeneshPB_pg.4__237 Phycomyces blakesleeanus fgeneshPB_pg.4__237 N 0.706