CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PTSG_02732
(
Salpingoeca rosetta
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
PTSG_02732
T08312_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTSG_02732T0
CCHC ZF
845
862
GNCHYCGKYGHRAAECRK
Links
Other
CCHC ZF
family RBPs
Other
Salpingoeca rosetta
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
dct-10
Caenorhabditis elegans
Y38H6C.5
N
0.722
DGIL_AUG5s2073g1t1
Acyrtosiphon pisum
DGIL_AUG5s2073g1t1
N
0.722