DGIL_AUG5s2073g1t1 (Acyrtosiphon pisum)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 DGIL_AUG5s2073g1t1 T08891_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
DGIL_AUG5s2073g1t1 CCHC ZF 134 150

Links

Other CCHC ZF family RBPs
Other Acyrtosiphon pisum RBPs

21 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK23596.1 Cannabis sativa PK23596.1 N 0.778
fgenesh1_pg.C_scaffold_58000098 Phytophthora ramorum fgenesh1_pg.C_scaffold_58000098 N 0.722
fgenesh1_pg.C_scaffold_49000015 Phytophthora ramorum fgenesh1_pg.C_scaffold_49000015 N 0.722
fgenesh1_pg.C_scaffold_32000002 Phytophthora ramorum fgenesh1_pg.C_scaffold_32000002 N 0.722
fgenesh1_pg.C_scaffold_6000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_6000001 N 0.722
fgenesh1_pg.C_scaffold_911000002 Phytophthora ramorum fgenesh1_pg.C_scaffold_911000002 N 0.722
PTSG_02732 Salpingoeca rosetta PTSG_02732 N 0.722
fgenesh1_pg.C_scaffold_937000002 Phytophthora ramorum fgenesh1_pg.C_scaffold_937000002 N 0.722
fgenesh1_pg.C_scaffold_315000002 Phytophthora ramorum fgenesh1_pg.C_scaffold_315000002 N 0.722
fgenesh1_pg.C_scaffold_737000002 Phytophthora ramorum fgenesh1_pg.C_scaffold_737000002 N 0.722
fgenesh1_pg.C_scaffold_2352000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_2352000001 N 0.722
fgenesh1_pg.C_scaffold_17000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_17000001 N 0.722
fgenesh1_pg.C_scaffold_1590000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_1590000001 N 0.722
fgenesh1_pg.C_scaffold_135000007 Phytophthora ramorum fgenesh1_pg.C_scaffold_135000007 N 0.722
fgenesh1_pg.C_scaffold_1347000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_1347000001 N 0.722
fgenesh1_pg.C_scaffold_20000020 Phytophthora ramorum fgenesh1_pg.C_scaffold_20000020 N 0.722
fgenesh1_pg.C_scaffold_2072000002 Phytophthora ramorum fgenesh1_pg.C_scaffold_2072000002 N 0.722
fgenesh1_pg.C_scaffold_2342000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_2342000001 N 0.722
fgenesh1_pg.C_scaffold_23000077 Phytophthora ramorum fgenesh1_pg.C_scaffold_23000077 N 0.722
fgenesh1_pg.C_scaffold_2102000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_2102000001 N 0.722
fgenesh1_pg.C_scaffold_1242000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_1242000001 N 0.722