CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PTTG_10254
(
Puccinia triticina
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
PTTG_10254
T08467_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTTG_10254T0
CCHC ZF
105
122
VACSNCGRRGHQSNNCPK
Links
Other
CCHC ZF
family RBPs
Other
Puccinia triticina
RBPs
14 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PTTG_05128
Puccinia triticina
PTTG_05128
N
0.889
PTTG_03218
Puccinia triticina
PTTG_03218
N
0.889
PTTG_11093
Puccinia triticina
PTTG_11093
N
0.889
PTTG_09555
Puccinia triticina
PTTG_09555
N
0.833
PTTG_06497
Puccinia triticina
PTTG_06497
N
0.778
PTTG_04996
Puccinia triticina
PTTG_04996
N
0.778
PTTG_08079
Puccinia triticina
PTTG_08079
N
0.778
PTTG_02420
Puccinia triticina
PTTG_02420
N
0.778
PTTG_01104
Puccinia triticina
PTTG_01104
N
0.778
PTTG_10840
Puccinia triticina
PTTG_10840
N
0.778
PTTG_03789
Puccinia triticina
PTTG_03789
N
0.722
PGTG_14423
Puccinia graminis
PGTG_14423
N
0.722
PGTG_06444
Puccinia graminis
PGTG_06444
N
0.722
PTTG_04161
Puccinia triticina
PTTG_04161
N
0.722