CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PTTG_10862
(
Puccinia triticina
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
PTTG_10862
T08493_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTTG_10862T0
CCHC ZF
269
286
GLCFRCVEQGHLAQDCPT
Links
Other
CCHC ZF
family RBPs
Other
Puccinia triticina
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PTTG_10291
Puccinia triticina
PTTG_10291
N
0.833
PTTG_10552
Puccinia triticina
PTTG_10552
N
0.722
PTTG_09070
Puccinia triticina
PTTG_09070
N
0.722
PTTG_08330
Puccinia triticina
PTTG_08330
N
0.722
PTTG_11563
Puccinia triticina
PTTG_11563
N
0.722
PTTG_01306
Puccinia triticina
PTTG_01306
N
0.722
PTTG_11068
Puccinia triticina
PTTG_11068
N
0.722