CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PTTG_09070
(
Puccinia triticina
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
PTTG_09070
T08438_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTTG_09070T0
CCHC ZF
333
350
GQCFRCGEKGHLARECPT
Links
Other
CCHC ZF
family RBPs
Other
Puccinia triticina
RBPs
41 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PTTG_10291
Puccinia triticina
PTTG_10291
N
0.889
PTTG_05310
Puccinia triticina
PTTG_05310
N
0.833
PTTG_10344
Puccinia triticina
PTTG_10344
N
0.833
PTTG_01003
Puccinia triticina
PTTG_01003
N
0.778
PTTG_06000
Puccinia triticina
PTTG_06000
N
0.778
PTTG_06629
Puccinia triticina
PTTG_06629
N
0.778
PTTG_06752
Puccinia triticina
PTTG_06752
N
0.778
PTTG_08342
Puccinia triticina
PTTG_08342
N
0.778
PTTG_09518
Puccinia triticina
PTTG_09518
N
0.778
PTTG_10119
Puccinia triticina
PTTG_10119
N
0.778
PTTG_04497
Puccinia triticina
PTTG_04497
N
0.778
PTTG_01306
Puccinia triticina
PTTG_01306
N
0.778
PTTG_06677
Puccinia triticina
PTTG_06677
N
0.778
PTTG_04681
Puccinia triticina
PTTG_04681
N
0.722
PTTG_05127
Puccinia triticina
PTTG_05127
N
0.722
PTTG_05279
Puccinia triticina
PTTG_05279
N
0.722
PTTG_06885
Puccinia triticina
PTTG_06885
N
0.722
PTTG_08980
Puccinia triticina
PTTG_08980
N
0.722
PTTG_09062
Puccinia triticina
PTTG_09062
N
0.722
PTTG_08665
Puccinia triticina
PTTG_08665
N
0.722
PTTG_08329
Puccinia triticina
PTTG_08329
N
0.722
PTTG_07232
Puccinia triticina
PTTG_07232
N
0.722
PTTG_03611
Puccinia triticina
PTTG_03611
N
0.722
gm1.300904
Emiliania huxleyi
gm1.300904
N
0.722
PTTG_10862
Puccinia triticina
PTTG_10862
N
0.722
PTTG_11057
Puccinia triticina
PTTG_11057
N
0.722
PTTG_11204
Puccinia triticina
PTTG_11204
N
0.722
PTTG_10751
Puccinia triticina
PTTG_10751
N
0.722
PTTG_10278
Puccinia triticina
PTTG_10278
N
0.722
PTTG_09697
Puccinia triticina
PTTG_09697
N
0.722
PTTG_10004
Puccinia triticina
PTTG_10004
N
0.722
CJA00051
Caenorhabditis japonica
CJA00051
N
0.722
ENSGACG00000001944
Gasterosteus aculeatus
ENSGACG00000001944
N
0.722
LOC_Os02g37790
Oryza sativa
LOC_Os02g37790
N
0.722
LOC_Os12g15720
Oryza sativa
LOC_Os12g15720
N
0.722
PTTG_09362
Puccinia triticina
PTTG_09362
N
0.722
LOC_Os02g26040
Oryza sativa
LOC_Os02g26040
N
0.722
LOC_Os01g32470
Oryza sativa
LOC_Os01g32470
N
0.722
ENSGACG00000013495
Gasterosteus aculeatus
ENSGACG00000013495
N
0.722
ENSGACG00000020110
Gasterosteus aculeatus
ENSGACG00000020110
N
0.722
PTTG_03581
Puccinia triticina
PTTG_03581
N
0.722