CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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DGIL_AUG5s4425g1t1
(
Acyrtosiphon pisum
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
DGIL_AUG5s4425g1t1
T08907_0.6
DroSpeGe (2008-Jul-18)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
DGIL_AUG5s4425g1t1
CCHC ZF
284
301
IKCYNCSGFGHIARDCPR
Links
Other
CCHC ZF
family RBPs
Other
Acyrtosiphon pisum
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NCBI_GNO_14600006
Daphnia pulex
NCBI_GNO_14600006
N
0.722
CBG21985
Caenorhabditis briggsae
CBG21985
N
0.722
CBG16380
Caenorhabditis briggsae
CBG16380
N
0.722
DGIL_AUG5s8628g1t2
Acyrtosiphon pisum
DGIL_AUG5s8628g1t2
N
0.722