NCBI_GNO_14600006 (Daphnia pulex)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 NCBI_GNO_14600006 T14685_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
NCBI_GNO_14600006 CCHC ZF 200 217

Links

Other CCHC ZF family RBPs
Other Daphnia pulex RBPs

15 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SNAP_00016463 Daphnia pulex SNAP_00016463 N 0.833
Minc10876 Meloidogyne incognita Minc10876 N 0.778
fgenesh1_pg.C_scaffold_212000013 Daphnia pulex fgenesh1_pg.C_scaffold_212000013 N 0.778
DGIL_AUG5s8628g1t2 Acyrtosiphon pisum DGIL_AUG5s8628g1t2 N 0.778
Minc00467 Meloidogyne incognita Minc00467 N 0.778
DGIL_AUG5s4425g1t1 Acyrtosiphon pisum DGIL_AUG5s4425g1t1 N 0.722
fgenesh2_pg.15_#_380 Fragilariopsis cylindrus fgenesh2_pg.15_#_380 N 0.722
DGIL_AUG5s10476g1t2 Acyrtosiphon pisum DGIL_AUG5s10476g1t2 N 0.722
DGIL_AUG5s7013g3t1 Acyrtosiphon pisum DGIL_AUG5s7013g3t1 N 0.722
Minc12443 Meloidogyne incognita Minc12443 N 0.722
Minc00058 Meloidogyne incognita Minc00058 N 0.722
Minc01889 Meloidogyne incognita Minc01889 N 0.722
Minc06343 Meloidogyne incognita Minc06343 N 0.722
Minc09197 Meloidogyne incognita Minc09197 N 0.722
Minc13978 Meloidogyne incognita Minc13978 N 0.722