estExt_fgenesh1_pg.C_90130 (Micromonas pusilla)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 estExt_fgenesh1_pg.C_90130 T13601_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_90130 CCHC ZF 188 204

Links

Other CCHC ZF family RBPs
Other Micromonas pusilla RBPs

65 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
UM00321 Ustilago maydis UM00321 N 0.824
PITG_10087 Phytophthora infestans PITG_10087 N 0.765
s_441997 Phytophthora sojae s_441997 N 0.765
fgenesh1_pg.C_scaffold_47000011 Phytophthora ramorum fgenesh1_pg.C_scaffold_47000011 N 0.765
RBBP6 Pan troglodytes ENSPTRG00000007897 N 0.706
ENSPPYG00000007201 Pongo pygmaeus ENSPPYG00000007201 N 0.706
RBBP6 Pteropus vampyrus ENSPVAG00000001110 N 0.706
RBBP6 Sorex araneus ENSSARG00000004977 N 0.706
Rbbp6 Rattus norvegicus ENSRNOG00000012806 N 0.706
RBBP6 Ochotona princeps ENSOPRG00000016272 N 0.706
RBBP6 Ornithorhynchus anatinus ENSOANG00000007673 N 0.706
ENSMODG00000024432 Monodelphis domestica ENSMODG00000024432 N 0.706
ENSMODG00000016318 Monodelphis domestica ENSMODG00000016318 N 0.706
RBBP6 Macaca mulatta ENSMMUG00000015908 N 0.706
ENSMODG00000024434 Monodelphis domestica ENSMODG00000024434 N 0.706
ENSMODG00000024435 Monodelphis domestica ENSMODG00000024435 N 0.706
RBBP6 Sus scrofa ENSSSCG00000007830 N 0.706
Rbbp6 Mus musculus ENSMUSG00000030779 N 0.706
RBBP6 Oryctolagus cuniculus ENSOCUG00000004346 N 0.706
RBBP6 Taeniopygia guttata ENSTGUG00000006185 N 0.706
e_gw1.147.34.1 Physcomitrella patens e_gw1.147.34.1 N 0.706
e_gw1.135.14.1 Postia placenta e_gw1.135.14.1 N 0.706
e_gw1.311.2.1 Postia placenta e_gw1.311.2.1 N 0.706
e_gw1.84.86.1 Physcomitrella patens e_gw1.84.86.1 N 0.706
e_gwh2.3.362.1 Phanerochaete chrysosporium e_gwh2.3.362.1 N 0.706
e_gw.4.464.1 Branchiostoma floridae e_gw.4.464.1 N 0.706
e_gw1.0.2594.1 Selaginella moellendorfii e_gw1.0.2594.1 N 0.706
Ein09_0330 Encephalitozoon intestinalis Ein09_0330 N 0.706
RBBP6 Tarsius syrichta ENSTSYG00000000822 N 0.706
RBBP6 Myotis lucifugus ENSMLUG00000010601 N 0.706
RBBP6 Tursiops truncatus ENSTTRG00000002696 N 0.706
RBBP6 Vicugna pacos ENSVPAG00000006458 N 0.706
ECU09_0340 Encephalitozoon cuniculi ECU09_0340 N 0.706
RBBP6 Spermophilus tridecemlineatus ENSSTOG00000016006 N 0.706
RBBP6 Macropus eugenii ENSMEUG00000014491 N 0.706
XP_002162513.1 Hydra magnipapillata XP_002162513.1 N 0.706
Genemark.8861_g Serpula lacrymans Genemark.8861_g N 0.706
CC1G_00892 Coprinopsis cinerea CC1G_00892 N 0.706
PITG_04956 Phytophthora infestans PITG_04956 N 0.706
DGIL_AUG5s1501g15p2t1 Acyrtosiphon pisum DGIL_AUG5s1501g15p2t1 N 0.706
SJAG_02668 Schizosaccharomyces japonicus SJAG_02668 N 0.706
fgeneshTM_pm.1_#_792 Tremella mesenterica fgeneshTM_pm.1_#_792 N 0.706
estExt_Genewise1.C_60832 Pleurotus ostreatus estExt_Genewise1.C_60832 N 0.706
estExt_Genewise1Plus.C_1270035 Capitella teleta estExt_Genewise1Plus.C_1270035 N 0.706
estExt_fgeneshMC_pg.C_40705 Mucor circinelloides estExt_fgeneshMC_pg.C_40705 N 0.706
eu2.Lbscf0002g03430 Laccaria bicolor eu2.Lbscf0002g03430 N 0.706
Ame_R017990 Ailuropoda melanoleuca Ame_R017990 N 0.706
estExt_fgenesh2_pm.C_60269 Heterobasidion annosum estExt_fgenesh2_pm.C_60269 N 0.706
estExt_fgenesh2_kg.C_60291 Agaricus bisporus estExt_fgenesh2_kg.C_60291 N 0.706
AAEL002729 Aedes aegypti AAEL002729 N 0.706
RBBP6 Bos taurus ENSBTAG00000009441 N 0.706
RBBP6 Gallus gallus ENSGALG00000006043 N 0.706
RBBP6 Homo sapiens ENSG00000122257 N 0.706
RBBP6 Gorilla gorilla ENSGGOG00000007137 N 0.706
RBBP6 Loxodonta africana ENSLAFG00000009528 N 0.706
RBBP6 Meleagris gallopavo ENSMGAG00000006423 N 0.706
estExt_fgenesh1_pm.C_120018 Mycosphaerella fijiensis estExt_fgenesh1_pm.C_120018 N 0.706
RBBP6 Erinaceus europaeus ENSEEUG00000001683 N 0.706
Q866R2_HORSE Equus caballus ENSECAG00000014572 N 0.706
RBBP6 Choloepus hoffmanni ENSCHOG00000000278 N 0.706
RBBP6 Canis familiaris ENSCAFG00000017566 N 0.706
LOC100395616 Callithrix jacchus ENSCJAG00000020661 N 0.706
RBBP6 Dasypus novemcinctus ENSDNOG00000015497 N 0.706
ENSDORG00000010285 Dipodomys ordii ENSDORG00000010285 N 0.706
RBBP6 Microcebus murinus ENSMICG00000008059 N 0.706