CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AGAP008075
(
Anopheles gambiae
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
AGAP008075
T09289_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AGAP008075-PA
CCHC ZF
5
22
NTCFKCDRPGHYARDCQN
AGAP008075-PA
CCHC ZF
44
61
EKCYKCNQMGHFARDCKE
AGAP008075-PA
CCHC ZF
64
80
DRCYRCNGSGHIARDCS
AGAP008075-PA
CCHC ZF
86
103
SCCYNCNQSGHLARNCPE
AGAP008075-PA
CCHC ZF
111
128
VSCYNCNKSGHISRNCPS
AGAP008075-PA
CCHC ZF
131
148
KSCYSCGKIGHLSRDCTE
Links
Other
CCHC ZF
family RBPs
Other
Anopheles gambiae
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAEL801114
Aedes aegypti
AAEL017419
N
0.991
CpipJ_CPIJ001891
Culex pipiens
CpipJ_CPIJ001891
N
0.981
CPIJ001891
Culex quinquefasciatus
CPIJ001891
N
0.981
BGIBMGA004191
Bombyx mori
BGIBMGA004191
N
0.722