CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CPIJ001891
(
Culex quinquefasciatus
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
CPIJ001891
T09805_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CPIJ001891-PA
CCHC ZF
4
21
NTCFKCDRPGHYARDCQN
CPIJ001891-PA
CCHC ZF
51
68
EKCYKCNQMGHFARDCKE
CPIJ001891-PA
CCHC ZF
71
87
DRCYRCNGSGHIARECS
CPIJ001891-PA
CCHC ZF
93
110
SCCYNCNQSGHLARNCPE
CPIJ001891-PA
CCHC ZF
118
135
VSCYNCNKSGHISRNCPT
CPIJ001891-PA
CCHC ZF
138
155
KSCYSCGKIGHLSRDCTE
Links
Other
CCHC ZF
family RBPs
Other
Culex quinquefasciatus
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CpipJ_CPIJ001891
Culex pipiens
CpipJ_CPIJ001891
N
1.000
AAEL801114
Aedes aegypti
AAEL017419
N
0.991
AGAP008075
Anopheles gambiae
AGAP008075
N
0.981
BGIBMGA004191
Bombyx mori
BGIBMGA004191
N
0.731