AT5G26618 (Arabidopsis thaliana)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 AT5G26618-TAIR-G T09409_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AT5G26618.1-P CCHC ZF 266 283

Links

Other CCHC ZF family RBPs
Other Arabidopsis thaliana RBPs

13 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT3G46375 Arabidopsis thaliana AT3G46375-TAIR-G N 1.000
AT1G46120 Arabidopsis thaliana AT1G46120-TAIR-G N 1.000
AT3G29775 Arabidopsis thaliana AT3G29775-TAIR-G N 0.944
NCBI_GNO_24800001 Daphnia pulex NCBI_GNO_24800001 N 0.722
SNAP_00029885 Daphnia pulex SNAP_00029885 N 0.722
fgenesh1_pg.C_scaffold_81000001 Daphnia pulex fgenesh1_pg.C_scaffold_81000001 N 0.722
fgenesh1_pg.C_scaffold_37000005 Daphnia pulex fgenesh1_pg.C_scaffold_37000005 N 0.722
ENSXETG00000026589 Xenopus tropicalis ENSXETG00000026589 N 0.722
ENSXETG00000026345 Xenopus tropicalis ENSXETG00000026345 N 0.722
ENSXETG00000027095 Xenopus tropicalis ENSXETG00000027095 N 0.722
ENSXETG00000027303 Xenopus tropicalis ENSXETG00000027303 N 0.722
fgenesh1_pg.C_scaffold_102000036 Daphnia pulex fgenesh1_pg.C_scaffold_102000036 N 0.722
ENSXETG00000001186 Xenopus tropicalis ENSXETG00000001186 N 0.722