fgenesh1_pg.C_scaffold_37000005 (Daphnia pulex)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 fgenesh1_pg.C_scaffold_37000005 T13939_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_37000005 CCHC ZF 366 383

Links

Other CCHC ZF family RBPs
Other Daphnia pulex RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pg.C_scaffold_102000036 Daphnia pulex fgenesh1_pg.C_scaffold_102000036 N 1.000
fgenesh1_pg.C_scaffold_81000001 Daphnia pulex fgenesh1_pg.C_scaffold_81000001 N 1.000
SNAP_00029885 Daphnia pulex SNAP_00029885 N 1.000
NCBI_GNO_24800001 Daphnia pulex NCBI_GNO_24800001 N 0.944
AT5G26618 Arabidopsis thaliana AT5G26618-TAIR-G N 0.722
AT1G46120 Arabidopsis thaliana AT1G46120-TAIR-G N 0.722
AT3G29775 Arabidopsis thaliana AT3G29775-TAIR-G N 0.722
AT3G46375 Arabidopsis thaliana AT3G46375-TAIR-G N 0.722