BRADI4G15700 (Brachypodium distachyon)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 BRADI4G15700 T09512_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI4G15700.1 CCHC ZF 78 95
BRADI4G15700.1 CCHC ZF 100 117
BRADI4G15700.1 CCHC ZF 119 136
BRADI4G15700.1 CCHC ZF 147 164
BRADI4G15700.1 CCHC ZF 174 185
BRADI4G15700.1 CCHC ZF 198 210
BRADI4G15700.1 CCHC ZF 227 244
BRADI4G15700.2 CCHC ZF 6 23
BRADI4G15700.2 CCHC ZF 25 42
BRADI4G15700.2 CCHC ZF 53 70
BRADI4G15700.2 CCHC ZF 80 91
BRADI4G15700.2 CCHC ZF 104 116
BRADI4G15700.2 CCHC ZF 133 150

Links

Other CCHC ZF family RBPs
Other Brachypodium distachyon RBPs

2 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GRMZM2G033022 Zea mays GRMZM2G033022 N 0.843
LOC_Os11g36480 Oryza sativa LOC_Os11g36480 N 0.835