LOC_Os11g36480 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os11g36480 T12439_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os11g36480.1 CCHC ZF 16 27
LOC_Os11g36480.1 CCHC ZF 40 52
LOC_Os11g36480.1 CCHC ZF 69 86
LOC_Os11g36480.2 CCHC ZF 6 23
LOC_Os11g36480.2 CCHC ZF 25 42
LOC_Os11g36480.2 CCHC ZF 53 69
LOC_Os11g36480.2 CCHC ZF 79 90
LOC_Os11g36480.2 CCHC ZF 103 115
LOC_Os11g36480.2 CCHC ZF 132 149

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

1 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BRADI4G15700 Brachypodium distachyon BRADI4G15700 N 0.835