CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CJA01250
(
Caenorhabditis japonica
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
CJA01250
T09639_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA01250
CCHC ZF
261
278
VTCYKCGEIGHYSNKCSQ
Links
Other
CCHC ZF
family RBPs
Other
Caenorhabditis japonica
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CJA03915
Caenorhabditis japonica
CJA03915
N
0.833
CJA26046
Caenorhabditis japonica
CJA26046
N
0.833
PTTG_11637
Puccinia triticina
PTTG_11637
N
0.722
ENSTSYG00000011201
Tarsius syrichta
ENSTSYG00000011201
N
0.722