CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CRE21310
(
Caenorhabditis remanei
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
CRE21310
T09898_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE21310
CCHC ZF
303
320
VTCFKCGERGHTAPQCPQ
Links
Other
CCHC ZF
family RBPs
Other
Caenorhabditis remanei
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CRE31410
Caenorhabditis remanei
CRE31410
N
0.889
CRE01522
Caenorhabditis remanei
CRE01522
N
0.833
CJA26046
Caenorhabditis japonica
CJA26046
N
0.722
CJA03915
Caenorhabditis japonica
CJA03915
N
0.722
PTTG_11637
Puccinia triticina
PTTG_11637
N
0.722