CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZCCHC6
(
Canis familiaris
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
ENSCAFG00000001331
T10007_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCAFP00000001916
CCHC ZF
963
980
VVCSLCKREGHLKKDCPE
ENSCAFP00000001916
CCHC ZF
1345
1362
RCCRICGKIGHFMKDCPM
ENSCAFP00000001916
CCHC ZF
1451
1468
KRCFICGREGHIKKECPQ
Links
Other
CCHC ZF
family RBPs
Other
Canis familiaris
RBPs
64 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ZCCHC6
Pan troglodytes
ENSPTRG00000021076
N
1.000
Zcchc6
Mus musculus
ENSMUSG00000035248
N
1.000
ENSPPYG00000019340
Pongo pygmaeus
ENSPPYG00000019340
N
1.000
ZCCHC6
Pteropus vampyrus
ENSPVAG00000004589
N
1.000
ZCCHC6
Felis catus
ENSFCAG00000003491
N
1.000
ZCCHC6
Gorilla gorilla
ENSGGOG00000007523
N
1.000
ZCCHC6
Tupaia belangeri
ENSTBEG00000010446
N
1.000
Zcchc6
Rattus norvegicus
ENSRNOG00000016629
N
1.000
ZCCHC6
Sus scrofa
ENSSSCG00000010952
N
1.000
ZCCHC6
Macaca mulatta
ENSMMUG00000003401
N
1.000
ZCCHC6
Spermophilus tridecemlineatus
ENSSTOG00000000586
N
1.000
ZCCHC6
Tarsius syrichta
ENSTSYG00000008907
N
1.000
ZCCHC6
Homo sapiens
ENSG00000083223
N
1.000
ZCCHC6
Callithrix jacchus
ENSCJAG00000001845
N
1.000
Ame_R002824
Ailuropoda melanoleuca
Ame_R002824
N
1.000
Zcchc6
Dipodomys ordii
ENSDORG00000009046
N
1.000
ZCCHC6
Equus caballus
ENSECAG00000014831
N
1.000
ZCCHC6
Tursiops truncatus
ENSTTRG00000004236
N
1.000
ZCCHC6
Bos taurus
ENSBTAG00000001737
N
1.000
ZCCHC6
Macropus eugenii
ENSMEUG00000006540
N
0.981
ZCCHC6
Microcebus murinus
ENSMICG00000016944
N
0.981
ZCCHC6
Gallus gallus
ENSGALG00000012607
N
0.981
ZCCHC6
Vicugna pacos
ENSVPAG00000001946
N
0.981
ZCCHC6
Monodelphis domestica
ENSMODG00000003542
N
0.981
ZCCHC6
Erinaceus europaeus
ENSEEUG00000012794
N
0.981
ZCCHC6
Taeniopygia guttata
ENSTGUG00000000624
N
0.963
ZCCHC6
Cavia porcellus
ENSCPOG00000002500
N
0.963
ZCCHC6
Oryctolagus cuniculus
ENSOCUG00000010949
N
0.926
zcchc6
Xenopus tropicalis
ENSXETG00000017552
N
0.870
ZCCHC6
Takifugu rubripes
ENSTRUG00000000750
N
0.778
ZCCHC11
Anolis carolinensis
ENSACAG00000008282
N
0.722
ZCCHC11
Takifugu rubripes
ENSTRUG00000000844
N
0.722
ZCCHC11
Oryzias latipes
ENSORLG00000013135
N
0.722
ZCCHC11
Taeniopygia guttata
ENSTGUG00000009011
N
0.722
ZCCHC11
Ornithorhynchus anatinus
ENSOANG00000012864
N
0.722
ZCCHC11
Macropus eugenii
ENSMEUG00000003865
N
0.722
ZCCHC11
Gasterosteus aculeatus
ENSGACG00000005282
N
0.722
ZCCHC11
Monodelphis domestica
ENSMODG00000000618
N
0.722
ZCCHC11
Gallus gallus
ENSGALG00000010629
N
0.722
ZCCHC11
Equus caballus
ENSECAG00000021261
N
0.704
zcchc11
Xenopus tropicalis
ENSXETG00000008061
N
0.704
ZCCHC11
Tursiops truncatus
ENSTTRG00000016142
N
0.704
ZCCHC11
Erinaceus europaeus
ENSEEUG00000003834
N
0.704
ZCCHC11
Tarsius syrichta
ENSTSYG00000009885
N
0.704
ZCCHC11
Cavia porcellus
ENSCPOG00000005086
N
0.704
ZCCHC11
Callithrix jacchus
ENSCJAG00000021588
N
0.704
ZCCHC11
Bos taurus
ENSBTAG00000002721
N
0.704
ZCCHC11
Choloepus hoffmanni
ENSCHOG00000010995
N
0.704
ENSCING00000008136
Ciona intestinalis
ENSCING00000008136
N
0.704
Ame_R003552
Ailuropoda melanoleuca
Ame_R003552
N
0.704
ZCCHC11
Echinops telfairi
ENSETEG00000016298
N
0.704
ZCCHC11
Homo sapiens
ENSG00000134744
N
0.704
ZCCHC11
Sorex araneus
ENSSARG00000009798
N
0.704
ZCCHC11
Sus scrofa
ENSSSCG00000003859
N
0.704
ZCCHC11
Oryctolagus cuniculus
ENSOCUG00000002390
N
0.704
Zcchc11
Mus musculus
ENSMUSG00000034610
N
0.704
ZCCHC11
Canis familiaris
ENSCAFG00000003734
N
0.704
ZCCHC11
Macaca mulatta
ENSMMUG00000017023
N
0.704
ZCCHC11
Microcebus murinus
ENSMICG00000015853
N
0.704
ZCCHC11
Otolemur garnettii
ENSOGAG00000005425
N
0.704
ZCCHC11
Ochotona princeps
ENSOPRG00000016362
N
0.704
ZCCHC11
Loxodonta africana
ENSLAFG00000003763
N
0.704
ENSPPYG00000001347
Pongo pygmaeus
ENSPPYG00000001347
N
0.704
ZCCHC11
Pan troglodytes
ENSPTRG00000000740
N
0.704