CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZCCHC11
(
Tarsius syrichta
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
ENSTSYG00000009885
T10547_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTSYP00000009064
CCHC ZF
912
929
IVCSICKKDGHSKNDCPE
ENSTSYP00000009064
CCHC ZF
1291
1308
RCCRVCGKIGHYMKDCPK
ENSTSYP00000009064
CCHC ZF
1356
1373
LRCFICGDAGHVRRECPE
Links
Other
CCHC ZF
family RBPs
Other
Tarsius syrichta
RBPs
58 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ZCCHC11
Erinaceus europaeus
ENSEEUG00000003834
N
1.000
ENSPPYG00000001347
Pongo pygmaeus
ENSPPYG00000001347
N
1.000
ZCCHC11
Equus caballus
ENSECAG00000021261
N
1.000
ZCCHC11
Sus scrofa
ENSSSCG00000003859
N
1.000
ZCCHC11
Cavia porcellus
ENSCPOG00000005086
N
1.000
ZCCHC11
Homo sapiens
ENSG00000134744
N
1.000
ZCCHC11
Loxodonta africana
ENSLAFG00000003763
N
1.000
Zcchc11
Mus musculus
ENSMUSG00000034610
N
1.000
ZCCHC11
Otolemur garnettii
ENSOGAG00000005425
N
1.000
ZCCHC11
Macaca mulatta
ENSMMUG00000017023
N
1.000
ZCCHC11
Pan troglodytes
ENSPTRG00000000740
N
1.000
ZCCHC11
Microcebus murinus
ENSMICG00000015853
N
1.000
ZCCHC11
Callithrix jacchus
ENSCJAG00000021588
N
1.000
ZCCHC11
Echinops telfairi
ENSETEG00000016298
N
1.000
ZCCHC11
Bos taurus
ENSBTAG00000002721
N
1.000
ZCCHC11
Tursiops truncatus
ENSTTRG00000016142
N
1.000
Ame_R003552
Ailuropoda melanoleuca
Ame_R003552
N
1.000
ZCCHC11
Canis familiaris
ENSCAFG00000003734
N
1.000
ZCCHC11
Choloepus hoffmanni
ENSCHOG00000010995
N
1.000
ZCCHC11
Sorex araneus
ENSSARG00000009798
N
0.981
ZCCHC11
Ochotona princeps
ENSOPRG00000016362
N
0.981
ZCCHC11
Oryctolagus cuniculus
ENSOCUG00000002390
N
0.981
ZCCHC11
Ornithorhynchus anatinus
ENSOANG00000012864
N
0.926
ZCCHC11
Anolis carolinensis
ENSACAG00000008282
N
0.926
ZCCHC11
Meleagris gallopavo
ENSMGAG00000011185
N
0.926
ZCCHC11
Monodelphis domestica
ENSMODG00000000618
N
0.926
ZCCHC11
Macropus eugenii
ENSMEUG00000003865
N
0.926
ZCCHC11
Taeniopygia guttata
ENSTGUG00000009011
N
0.926
ZCCHC11
Gallus gallus
ENSGALG00000010629
N
0.926
zcchc11
Xenopus tropicalis
ENSXETG00000008061
N
0.870
ZCCHC11
Oryzias latipes
ENSORLG00000013135
N
0.815
ZCCHC11
Gasterosteus aculeatus
ENSGACG00000005282
N
0.815
ZCCHC11
Takifugu rubripes
ENSTRUG00000000844
N
0.815
ZCCHC6
Erinaceus europaeus
ENSEEUG00000012794
N
0.722
ZCCHC6
Taeniopygia guttata
ENSTGUG00000000624
N
0.722
ENSPPYG00000019340
Pongo pygmaeus
ENSPPYG00000019340
N
0.704
ZCCHC6
Pan troglodytes
ENSPTRG00000021076
N
0.704
ZCCHC6
Sus scrofa
ENSSSCG00000010952
N
0.704
ZCCHC6
Tupaia belangeri
ENSTBEG00000010446
N
0.704
Zcchc6
Rattus norvegicus
ENSRNOG00000016629
N
0.704
ZCCHC6
Pteropus vampyrus
ENSPVAG00000004589
N
0.704
ZCCHC6
Spermophilus tridecemlineatus
ENSSTOG00000000586
N
0.704
ZCCHC6
Tarsius syrichta
ENSTSYG00000008907
N
0.704
ZCCHC6
Gorilla gorilla
ENSGGOG00000007523
N
0.704
ZCCHC6
Callithrix jacchus
ENSCJAG00000001845
N
0.704
ZCCHC6
Cavia porcellus
ENSCPOG00000002500
N
0.704
ZCCHC6
Canis familiaris
ENSCAFG00000001331
N
0.704
ZCCHC6
Bos taurus
ENSBTAG00000001737
N
0.704
ZCCHC6
Vicugna pacos
ENSVPAG00000001946
N
0.704
Ame_R002824
Ailuropoda melanoleuca
Ame_R002824
N
0.704
Zcchc6
Dipodomys ordii
ENSDORG00000009046
N
0.704
ZCCHC6
Equus caballus
ENSECAG00000014831
N
0.704
ZCCHC6
Tursiops truncatus
ENSTTRG00000004236
N
0.704
ZCCHC6
Macaca mulatta
ENSMMUG00000003401
N
0.704
ZCCHC6
Gallus gallus
ENSGALG00000012607
N
0.704
ZCCHC6
Homo sapiens
ENSG00000083223
N
0.704
ZCCHC6
Felis catus
ENSFCAG00000003491
N
0.704
Zcchc6
Mus musculus
ENSMUSG00000035248
N
0.704