CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZCCHC8
(
Gallus gallus
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
ENSGALG00000004486
T10216_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGALP00000007133
CCHC ZF
222
239
SHCFNCGSEEHQIKDCPK
Links
Other
CCHC ZF
family RBPs
Other
Gallus gallus
RBPs
39 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ZCCHC8
Meleagris gallopavo
ENSMGAG00000004799
N
1.000
ZCCHC8
Bos taurus
ENSBTAG00000006114
N
0.833
ZCCHC8
Canis familiaris
ENSCAFG00000007859
N
0.833
Ame_R000861
Ailuropoda melanoleuca
Ame_R000861
N
0.833
ZCCHC8
Tursiops truncatus
ENSTTRG00000015809
N
0.833
ZCCHC8
Taeniopygia guttata
ENSTGUG00000006286
N
0.833
ZCCHC8
Callithrix jacchus
ENSCJAG00000020409
N
0.833
ZCCHC8
Gorilla gorilla
ENSGGOG00000027926
N
0.833
ZCCHC8
Cavia porcellus
ENSCPOG00000014385
N
0.833
ZCCHC8
Felis catus
ENSFCAG00000010608
N
0.833
ZCCHC8
Homo sapiens
ENSG00000033030
N
0.833
ZCCHC8
Equus caballus
ENSECAG00000006984
N
0.833
Zcchc8
Dipodomys ordii
ENSDORG00000008756
N
0.833
ZCCHC8
Dasypus novemcinctus
ENSDNOG00000008881
N
0.833
ZCCHC8
Sus scrofa
ENSSSCG00000009792
N
0.833
ZCCHC8
Spermophilus tridecemlineatus
ENSSTOG00000001683
N
0.833
ZCCHC8
Ochotona princeps
ENSOPRG00000013758
N
0.833
ZCCHC8
Microcebus murinus
ENSMICG00000013486
N
0.833
ZCCHC8
Oryctolagus cuniculus
ENSOCUG00000013759
N
0.833
ZCCHC8
Macaca mulatta
ENSMMUG00000013643
N
0.833
ZCCHC8
Monodelphis domestica
ENSMODG00000012264
N
0.833
ZCCHC8
Ornithorhynchus anatinus
ENSOANG00000006199
N
0.833
ENSPPYG00000005068
Pongo pygmaeus
ENSPPYG00000005068
N
0.833
ZCCHC8
Loxodonta africana
ENSLAFG00000016477
N
0.833
ZCCHC8
Pteropus vampyrus
ENSPVAG00000001276
N
0.833
ZCCHC8
Pan troglodytes
ENSPTRG00000005579
N
0.833
ZCCHC8
Macropus eugenii
ENSMEUG00000003497
N
0.833
Zcchc8
Mus musculus
ENSMUSG00000029427
N
0.778
ZCCHC8
Echinops telfairi
ENSETEG00000004735
N
0.778
ZCCHC8
Myotis lucifugus
ENSMLUG00000005334
N
0.778
Q6DD45
Xenopus laevis
Q6DD45
N
0.778
zcchc8
Xenopus tropicalis
ENSXETG00000007797
N
0.778
ZCCHC8
Procavia capensis
ENSPCAG00000016551
N
0.778
ZCCHC8
Sorex araneus
ENSSARG00000003982
N
0.778
AAH77784
Xenopus laevis
AAH77784
N
0.778
D3ZUL8_RAT
Rattus norvegicus
ENSRNOG00000001243
N
0.778
ZCCHC8
Tupaia belangeri
ENSTBEG00000006192
N
0.778
ppa003054m
Prunus persica
ppa003054m
N
0.722
ZCCHC8
Anolis carolinensis
ENSACAG00000001545
N
0.722