LOC_Os01g16160 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os01g16160 T10722_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os01g16160.1 CCHC ZF 274 291

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

26 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os04g12410 Oryza sativa LOC_Os04g12410 N 1.000
LOC_Os07g11240 Oryza sativa LOC_Os07g11240 N 0.944
LOC_Os06g39160 Oryza sativa LOC_Os06g39160 N 0.944
LOC_Os05g08880 Oryza sativa LOC_Os05g08880 N 0.944
LOC_Os07g22430 Oryza sativa LOC_Os07g22430 N 0.944
LOC_Os08g29700 Oryza sativa LOC_Os08g29700 N 0.944
LOC_Os10g01020 Oryza sativa LOC_Os10g01020 N 0.944
LOC_Os09g08020 Oryza sativa LOC_Os09g08020 N 0.944
LOC_Os09g07220 Oryza sativa LOC_Os09g07220 N 0.944
LOC_Os04g17300 Oryza sativa LOC_Os04g17300 N 0.944
LOC_Os02g39780 Oryza sativa LOC_Os02g39780 N 0.944
LOC_Os02g49120 Oryza sativa LOC_Os02g49120 N 0.944
LOC_Os02g34660 Oryza sativa LOC_Os02g34660 N 0.944
LOC_Os02g19620 Oryza sativa LOC_Os02g19620 N 0.889
LOC_Os12g25990 Oryza sativa LOC_Os12g25990 N 0.889
LOC_Os03g13680 Oryza sativa LOC_Os03g13680 N 0.889
LOC_Os04g08784 Oryza sativa LOC_Os04g08784 N 0.889
LOC_Os03g35788 Oryza sativa LOC_Os03g35788 N 0.889
LOC_Os01g33460 Oryza sativa LOC_Os01g33460 N 0.889
LOC_Os06g23890 Oryza sativa LOC_Os06g23890 N 0.889
LOC_Os03g41840 Oryza sativa LOC_Os03g41840 N 0.889
LOC_Os04g18770 Oryza sativa LOC_Os04g18770 N 0.889
LOC_Os08g39760 Oryza sativa LOC_Os08g39760 N 0.833
LOC_Os03g33530 Oryza sativa LOC_Os03g33530 N 0.833
Aqu1.220795 Amphimedon queenslandica Aqu1.220795 N 0.722
LOC_Os03g33319 Oryza sativa LOC_Os03g33319 N 0.722