Aqu1.220795 (Amphimedon queenslandica)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 Aqu1.220795 T13302_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Aqu1.220795 CCHC ZF 58 75

Links

Other CCHC ZF family RBPs
Other Amphimedon queenslandica RBPs

5 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Aqu1.220153 Amphimedon queenslandica Aqu1.220153 N 0.944
LOC_Os04g12410 Oryza sativa LOC_Os04g12410 N 0.722
LOC_Os01g16160 Oryza sativa LOC_Os01g16160 N 0.722
fgenesh1_pg.C_scaffold_5000049 Cochliobolus heterostrophus C5 fgenesh1_pg.C_scaffold_5000049 N 0.722
fgenesh1_pg.C_scaffold_24000130 Cochliobolus heterostrophus C5 fgenesh1_pg.C_scaffold_24000130 N 0.722