LOC_Os01g23200 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os01g23200 T10745_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os01g23200.1 CCHC ZF 267 281

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

45 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os04g05710 Oryza sativa LOC_Os04g05710 N 1.000
LOC_Os12g23060 Oryza sativa LOC_Os12g23060 N 0.833
LOC_Os12g26790 Oryza sativa LOC_Os12g26790 N 0.833
LOC_Os11g27050 Oryza sativa LOC_Os11g27050 N 0.833
LOC_Os09g08750 Oryza sativa LOC_Os09g08750 N 0.833
LOC_Os06g24960 Oryza sativa LOC_Os06g24960 N 0.833
LOC_Os07g20330 Oryza sativa LOC_Os07g20330 N 0.833
LOC_Os07g26220 Oryza sativa LOC_Os07g26220 N 0.833
LOC_Os07g16000 Oryza sativa LOC_Os07g16000 N 0.833
LOC_Os07g30430 Oryza sativa LOC_Os07g30430 N 0.833
LOC_Os04g11310 Oryza sativa LOC_Os04g11310 N 0.833
LOC_Os10g28930 Oryza sativa LOC_Os10g28930 N 0.833
LOC_Os01g19100 Oryza sativa LOC_Os01g19100 N 0.833
LOC_Os01g25679 Oryza sativa LOC_Os01g25679 N 0.833
LOC_Os02g34450 Oryza sativa LOC_Os02g34450 N 0.833
LOC_Os11g30860 Oryza sativa LOC_Os11g30860 N 0.833
LOC_Os11g03250 Oryza sativa LOC_Os11g03250 N 0.833
LOC_Os04g07510 Oryza sativa LOC_Os04g07510 N 0.833
LOC_Os04g05730 Oryza sativa LOC_Os04g05730 N 0.833
LOC_Os03g59810 Oryza sativa LOC_Os03g59810 N 0.833
LOC_Os01g38420 Oryza sativa LOC_Os01g38420 N 0.800
LOC_Os01g34250 Oryza sativa LOC_Os01g34250 N 0.778
LOC_Os05g29120 Oryza sativa LOC_Os05g29120 N 0.778
LOC_Os07g33500 Oryza sativa LOC_Os07g33500 N 0.778
LOC_Os12g13330 Oryza sativa LOC_Os12g13330 N 0.733
LOC_Os04g12280 Oryza sativa LOC_Os04g12280 N 0.733
LOC_Os01g24400 Oryza sativa LOC_Os01g24400 N 0.733
LOC_Os12g43179 Oryza sativa LOC_Os12g43179 N 0.722
LOC_Os11g23244 Oryza sativa LOC_Os11g23244 N 0.722
LOC_Os12g33260 Oryza sativa LOC_Os12g33260 N 0.722
LOC_Os11g21830 Oryza sativa LOC_Os11g21830 N 0.722
LOC_Os11g38820 Oryza sativa LOC_Os11g38820 N 0.722
LOC_Os11g39950 Oryza sativa LOC_Os11g39950 N 0.722
LOC_Os07g17090 Oryza sativa LOC_Os07g17090 N 0.722
LOC_Os04g43950 Oryza sativa LOC_Os04g43950 N 0.722
LOC_Os04g09480 Oryza sativa LOC_Os04g09480 N 0.722
LOC_Os03g44360 Oryza sativa LOC_Os03g44360 N 0.722
LOC_Os02g44180 Oryza sativa LOC_Os02g44180 N 0.722
LOC_Os11g19910 Oryza sativa LOC_Os11g19910 N 0.722
LOC_Os05g24310 Oryza sativa LOC_Os05g24310 N 0.722
LOC_Os10g06430 Oryza sativa LOC_Os10g06430 N 0.722
LOC_Os07g22090 Oryza sativa LOC_Os07g22090 N 0.722
LOC_Os07g15080 Oryza sativa LOC_Os07g15080 N 0.722
LOC_Os06g31350 Oryza sativa LOC_Os06g31350 N 0.722
LOC_Os04g18660 Oryza sativa LOC_Os04g18660 N 0.706