LOC_Os01g37440 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os01g37440 T10806_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os01g37440.1 CCHC ZF 189 206

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os01g72030 Oryza sativa LOC_Os01g72030 N 1.000
LOC_Os11g02590 Oryza sativa LOC_Os11g02590 N 1.000
LOC_Os12g02010 Oryza sativa LOC_Os12g02010 N 1.000
LOC_Os09g15960 Oryza sativa LOC_Os09g15960 N 0.944
LOC_Os08g34230 Oryza sativa LOC_Os08g34230 N 0.944
LOC_Os07g03476 Oryza sativa LOC_Os07g03476 N 0.944
LOC_Os07g03390 Oryza sativa LOC_Os07g03390 N 0.944
LOC_Os07g03297 Oryza sativa LOC_Os07g03297 N 0.944
MDP0000130753 Malus x domestica MDP0000130753 N 0.722
LOC_Os05g01180 Oryza sativa LOC_Os05g01180 N 0.722