LOC_Os07g03476 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os07g03476 T11725_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os07g03476.1 CCHC ZF 278 295

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

12 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os07g03390 Oryza sativa LOC_Os07g03390 N 1.000
LOC_Os07g03297 Oryza sativa LOC_Os07g03297 N 1.000
LOC_Os01g72030 Oryza sativa LOC_Os01g72030 N 0.944
LOC_Os12g02010 Oryza sativa LOC_Os12g02010 N 0.944
LOC_Os11g02590 Oryza sativa LOC_Os11g02590 N 0.944
LOC_Os01g37440 Oryza sativa LOC_Os01g37440 N 0.944
LOC_Os09g15960 Oryza sativa LOC_Os09g15960 N 0.889
LOC_Os08g34230 Oryza sativa LOC_Os08g34230 N 0.889
SNAP_00036164 Daphnia pulex SNAP_00036164 N 0.722
NCBI_GNO_20300016 Daphnia pulex NCBI_GNO_20300016 N 0.722
ppa024147m Prunus persica ppa024147m N 0.722
nasonia_NCBI_hmm241144 Nasonia vitripennis nasonia_NCBI_hmm241144 N 0.722