LOC_Os04g48660 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os04g48660 T11325_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os04g48660.1 CCHC ZF 224 241

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

42 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os12g28690 Oryza sativa LOC_Os12g28690 N 0.889
LOC_Os11g39950 Oryza sativa LOC_Os11g39950 N 0.889
LOC_Os11g19910 Oryza sativa LOC_Os11g19910 N 0.889
LOC_Os12g33260 Oryza sativa LOC_Os12g33260 N 0.889
LOC_Os02g44180 Oryza sativa LOC_Os02g44180 N 0.889
LOC_Os04g43950 Oryza sativa LOC_Os04g43950 N 0.889
LOC_Os03g44360 Oryza sativa LOC_Os03g44360 N 0.889
LOC_Os10g06430 Oryza sativa LOC_Os10g06430 N 0.889
LOC_Os11g38820 Oryza sativa LOC_Os11g38820 N 0.889
LOC_Os07g17090 Oryza sativa LOC_Os07g17090 N 0.889
LOC_Os07g15080 Oryza sativa LOC_Os07g15080 N 0.889
LOC_Os06g31350 Oryza sativa LOC_Os06g31350 N 0.889
LOC_Os12g18320 Oryza sativa LOC_Os12g18320 N 0.833
LOC_Os11g23244 Oryza sativa LOC_Os11g23244 N 0.833
LOC_Os11g21830 Oryza sativa LOC_Os11g21830 N 0.833
LOC_Os12g43179 Oryza sativa LOC_Os12g43179 N 0.833
LOC_Os11g18620 Oryza sativa LOC_Os11g18620 N 0.833
LOC_Os11g24000 Oryza sativa LOC_Os11g24000 N 0.778
LOC_Os08g23510 Oryza sativa LOC_Os08g23510 N 0.778
LOC_Os01g25679 Oryza sativa LOC_Os01g25679 N 0.722
LOC_Os02g04940 Oryza sativa LOC_Os02g04940 N 0.722
LOC_Os07g16000 Oryza sativa LOC_Os07g16000 N 0.722
LOC_Os02g34450 Oryza sativa LOC_Os02g34450 N 0.722
LOC_Os04g07510 Oryza sativa LOC_Os04g07510 N 0.722
LOC_Os04g18750 Oryza sativa LOC_Os04g18750 N 0.722
LOC_Os04g11310 Oryza sativa LOC_Os04g11310 N 0.722
LOC_Os01g19100 Oryza sativa LOC_Os01g19100 N 0.722
LOC_Os04g05730 Oryza sativa LOC_Os04g05730 N 0.722
LOC_Os03g59810 Oryza sativa LOC_Os03g59810 N 0.722
LOC_Os07g20330 Oryza sativa LOC_Os07g20330 N 0.722
LOC_Os11g27050 Oryza sativa LOC_Os11g27050 N 0.722
LOC_Os11g30860 Oryza sativa LOC_Os11g30860 N 0.722
LOC_Os07g30430 Oryza sativa LOC_Os07g30430 N 0.722
LOC_Os11g03250 Oryza sativa LOC_Os11g03250 N 0.722
LOC_Os10g28930 Oryza sativa LOC_Os10g28930 N 0.722
LOC_Os06g24960 Oryza sativa LOC_Os06g24960 N 0.722
LOC_Os07g26220 Oryza sativa LOC_Os07g26220 N 0.722
XP_001180278.1 Strongylocentrotus purpuratus XP_001180278.1 N 0.722
LOC_Os09g08750 Oryza sativa LOC_Os09g08750 N 0.722
LOC_Os12g26790 Oryza sativa LOC_Os12g26790 N 0.722
LOC_Os12g23060 Oryza sativa LOC_Os12g23060 N 0.722
XP_001200167.1 Strongylocentrotus purpuratus XP_001200167.1 N 0.722