LOC_Os05g36940 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os05g36940 T11525_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os05g36940.1 CCHC ZF 303 320

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os06g43540 Oryza sativa LOC_Os06g43540 N 1.000
LOC_Os08g38640 Oryza sativa LOC_Os08g38640 N 1.000
LOC_Os04g29380 Oryza sativa LOC_Os04g29380 N 0.944
LOC_Os10g04074 Oryza sativa LOC_Os10g04074 N 0.944
LOC_Os01g15690 Oryza sativa LOC_Os01g15690 N 0.944
LOC_Os04g54450 Oryza sativa LOC_Os04g54450 N 0.944
LOC_Os12g01090 Oryza sativa LOC_Os12g01090 N 0.889
LOC_Os02g34030 Oryza sativa LOC_Os02g34030 N 0.778
LOC_Os10g24640 Oryza sativa LOC_Os10g24640 N 0.722
fgenesh1_pg.C_scaffold_9000406 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_9000406 N 0.722