LOC_Os08g21280 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os08g21280 T11979_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os08g21280.1 CCHC ZF 164 176

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

6 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os11g27700 Oryza sativa LOC_Os11g27700 N 0.923
Minc03468 Meloidogyne incognita Minc03468 N 0.733
LOC_Os06g24790 Oryza sativa LOC_Os06g24790 N 0.722
LOC_Os06g21640 Oryza sativa LOC_Os06g21640 N 0.722
LOC_Os02g18520 Oryza sativa LOC_Os02g18520 N 0.722
LOC_Os12g17860 Oryza sativa LOC_Os12g17860 N 0.722