LOC_Os11g27700 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os11g27700 T12413_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os11g27700.1 CCHC ZF 57 69

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os08g21280 Oryza sativa LOC_Os08g21280 N 0.923
LOC_Os06g32120 Oryza sativa LOC_Os06g32120 N 0.722
LOC_Os06g31640 Oryza sativa LOC_Os06g31640 N 0.722
LOC_Os05g37230 Oryza sativa LOC_Os05g37230 N 0.722
LOC_Os05g19330 Oryza sativa LOC_Os05g19330 N 0.722
LOC_Os06g48440 Oryza sativa LOC_Os06g48440 N 0.722
LOC_Os08g12210 Oryza sativa LOC_Os08g12210 N 0.722
LOC_Os09g14790 Oryza sativa LOC_Os09g14790 N 0.722
LOC_Os09g02110 Oryza sativa LOC_Os09g02110 N 0.722
LOC_Os09g01450 Oryza sativa LOC_Os09g01450 N 0.722
LOC_Os05g16850 Oryza sativa LOC_Os05g16850 N 0.722
LOC_Os05g04790 Oryza sativa LOC_Os05g04790 N 0.722
LOC_Os01g35140 Oryza sativa LOC_Os01g35140 N 0.722
13114.t00078 Oryza sativa 13114.t00078 N 0.722
LOC_Os12g33690 Oryza sativa LOC_Os12g33690 N 0.722
LOC_Os12g21640 Oryza sativa LOC_Os12g21640 N 0.722
LOC_Os02g02060 Oryza sativa LOC_Os02g02060 N 0.722
LOC_Os02g19840 Oryza sativa LOC_Os02g19840 N 0.722
LOC_Os04g55320 Oryza sativa LOC_Os04g55320 N 0.722
LOC_Os04g53890 Oryza sativa LOC_Os04g53890 N 0.722
LOC_Os04g34260 Oryza sativa LOC_Os04g34260 N 0.722
LOC_Os03g15450 Oryza sativa LOC_Os03g15450 N 0.722
LOC_Os11g43460 Oryza sativa LOC_Os11g43460 N 0.722