LOC_Os08g40550 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os08g40550 T12046_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os08g40550.1 CCHC ZF 432 446

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

32 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os07g17260 Oryza sativa LOC_Os07g17260 N 0.933
LOC_Os01g16850 Oryza sativa LOC_Os01g16850 N 0.778
LOC_Os12g40060 Oryza sativa LOC_Os12g40060 N 0.778
LOC_Os12g10900 Oryza sativa LOC_Os12g10900 N 0.778
LOC_Os02g17720 Oryza sativa LOC_Os02g17720 N 0.778
LOC_Os04g41520 Oryza sativa LOC_Os04g41520 N 0.778
LOC_Os06g06802 Oryza sativa LOC_Os06g06802 N 0.778
LOC_Os06g05680 Oryza sativa LOC_Os06g05680 N 0.778
LOC_Os12g09260 Oryza sativa LOC_Os12g09260 N 0.778
LOC_Os01g50090 Oryza sativa LOC_Os01g50090 N 0.778
LOC_Os09g29810 Oryza sativa LOC_Os09g29810 N 0.778
LOC_Os10g41610 Oryza sativa LOC_Os10g41610 N 0.778
LOC_Os10g07578 Oryza sativa LOC_Os10g07578 N 0.778
LOC_Os04g22050 Oryza sativa LOC_Os04g22050 N 0.750
LOC_Os04g07580 Oryza sativa LOC_Os04g07580 N 0.750
LOC_Os11g35590 Oryza sativa LOC_Os11g35590 N 0.733
LOC_Os10g29420 Oryza sativa LOC_Os10g29420 N 0.722
LOC_Os10g17540 Oryza sativa LOC_Os10g17540 N 0.722
LOC_Os06g41690 Oryza sativa LOC_Os06g41690 N 0.722
LOC_Os08g15010 Oryza sativa LOC_Os08g15010 N 0.722
LOC_Os07g18970 Oryza sativa LOC_Os07g18970 N 0.722
LOC_Os07g05600 Oryza sativa LOC_Os07g05600 N 0.722
LOC_Os04g35870 Oryza sativa LOC_Os04g35870 N 0.722
LOC_Os04g13350 Oryza sativa LOC_Os04g13350 N 0.722
LOC_Os11g10630 Oryza sativa LOC_Os11g10630 N 0.722
LOC_Os11g44190 Oryza sativa LOC_Os11g44190 N 0.722
LOC_Os11g45610 Oryza sativa LOC_Os11g45610 N 0.722
LOC_Os09g14500 Oryza sativa LOC_Os09g14500 N 0.722
LOC_Os02g06810 Oryza sativa LOC_Os02g06810 N 0.722
LOC_Os12g07910 Oryza sativa LOC_Os12g07910 N 0.722
LOC_Os02g20200 Oryza sativa LOC_Os02g20200 N 0.722
LOC_Os04g24570 Oryza sativa LOC_Os04g24570 N 0.722