LOC_Os12g15720 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os12g15720 T12514_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os12g15720.1 CCHC ZF 205 222

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os01g32470 Oryza sativa LOC_Os01g32470 N 1.000
LOC_Os02g26040 Oryza sativa LOC_Os02g26040 N 1.000
LOC_Os02g37790 Oryza sativa LOC_Os02g37790 N 1.000
LOC_Os04g33410 Oryza sativa LOC_Os04g33410 N 0.889
PTTG_01306 Puccinia triticina PTTG_01306 N 0.778
PTTG_09070 Puccinia triticina PTTG_09070 N 0.722
PTTG_04497 Puccinia triticina PTTG_04497 N 0.722
PTTG_06752 Puccinia triticina PTTG_06752 N 0.722