AIR1 (Saccharomyces cerevisiae)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 YIL079C T12963_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
YIL079C CCHC ZF 74 91
YIL079C CCHC ZF 112 129
YIL079C CCHC ZF 173 190

Links

Other CCHC ZF family RBPs
Other Saccharomyces cerevisiae RBPs

16 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
10955_YIL079C Saccharomyces paradoxus 10955_YIL079C N 0.963
10842_YIL079C Saccharomyces mikatae 10842_YIL079C N 0.907
11653_YIL079C Saccharomyces bayanus 11653_YIL079C N 0.889
SAKL0F09636g Lachancea kluyveri SAKL0F09636g N 0.815
KLTH0A05214g Kluyveromyces thermotolerans KLTH0A05214g N 0.796
Scas_Contig704.11 Saccharomyces castellii Scas_Contig704.11 N 0.796
KLTH0G17424g Kluyveromyces thermotolerans KLTH0G17424g N 0.778
Kwal_1436 Kluyveromyces waltii Kwal_1436 N 0.759
3115_YDL175C Saccharomyces paradoxus 3115_YDL175C N 0.741
Skud_Contig2045.4 Saccharomyces kudriavzevii Skud_Contig2045.4 N 0.741
2573_YDL175C Saccharomyces mikatae 2573_YDL175C N 0.741
AIR2 Saccharomyces cerevisiae YDL175C N 0.741
ZYRO0C09108g Zygosaccharomyces rouxii ZYRO0C09108g N 0.722
CAGL0J09460g Candida glabrata CAGL0J09460g N 0.722
Kwal_5985 Kluyveromyces waltii Kwal_5985 N 0.722
KLLA0F05896g Kluyveromyces lactis KLLA0F05896g N 0.704