CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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170151
(
Helobdella robusta
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
170151
T13151_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
170151
CCHC ZF
372
389
GLCFKCRQPGHLSKNCNN
Links
Other
CCHC ZF
family RBPs
Other
Helobdella robusta
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
184139
Helobdella robusta
184139
N
1.000
171304
Helobdella robusta
171304
N
1.000
180025
Helobdella robusta
180025
N
1.000
173198
Helobdella robusta
173198
N
1.000
fgenesh3_pg.112__20
Postia placenta
fgenesh3_pg.112__20
N
0.722