cassava5289.m1 (Manihot esculenta)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 cassava5289.m1 T13461_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
cassava5289.m1 CCHC ZF 258 275

Links

Other CCHC ZF family RBPs
Other Manihot esculenta RBPs

2 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava28357.m1 Manihot esculenta cassava28357.m1 N 0.722
fgenesh1_pg.C_scaffold_9000406 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_9000406 N 0.722