cassava9003.m1 (Manihot esculenta)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 cassava9003.m1 T13472_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
cassava9003.m1 CCHC ZF 54 70

Links

Other CCHC ZF family RBPs
Other Manihot esculenta RBPs

5 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava28757.m1 Manihot esculenta cassava28757.m1 N 0.941
cassava28473.m1 Manihot esculenta cassava28473.m1 N 0.824
cassava10734.m1 Manihot esculenta cassava10734.m1 N 0.765
cassava45661.m1 Manihot esculenta cassava45661.m1 N 0.706
Minc00264 Meloidogyne incognita Minc00264 N 0.706