Cucsa.179950 (Cucumis sativus)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 Cucsa.179950 T13495_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.179950.1 CCHC ZF 91 108
Cucsa.179950.1 CCHC ZF 273 284
Cucsa.179950.1 CCHC ZF 307 324
Cucsa.179950.2 CCHC ZF 91 108

Links

Other CCHC ZF family RBPs
Other Cucumis sativus RBPs

3 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000154442 Malus x domestica MDP0000154442 N 0.833
LOC_Os07g27900 Oryza sativa LOC_Os07g27900 N 0.722
GRMZM2G069218 Zea mays GRMZM2G069218 N 0.722