CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GRMZM2G069218
(
Zea mays
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
GRMZM2G069218
T15025_0.6
MaizeSequence (2009-Oct-16)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G069218_P01
CCHC ZF
92
109
GSCFKCGDPGHWARECPQ
Links
Other
CCHC ZF
family RBPs
Other
Zea mays
RBPs
9 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSSARG00000013351
Sorex araneus
ENSSARG00000013351
N
0.722
Cucsa.179950
Cucumis sativus
Cucsa.179950
N
0.722
fgeneshEH_pg.19__19
Emiliania huxleyi
fgeneshEH_pg.19__19
N
0.722
ENSOPRG00000002588
Ochotona princeps
ENSOPRG00000002588
N
0.722
ENSDNOG00000002674
Dasypus novemcinctus
ENSDNOG00000002674
N
0.722
PTTG_09362
Puccinia triticina
PTTG_09362
N
0.722
PTTG_11204
Puccinia triticina
PTTG_11204
N
0.722
PTTG_11637
Puccinia triticina
PTTG_11637
N
0.722
MDP0000186936
Malus x domestica
MDP0000186936
N
0.722