CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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e_gww2.1.919.1
(
Phanerochaete chrysosporium
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
e_gww2.1.919.1
T13575_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gww2.1.919.1
CCHC ZF
348
365
NLCMFCAKPGHKARDCTN
Links
Other
CCHC ZF
family RBPs
Other
Phanerochaete chrysosporium
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
XP_001193133.1
Strongylocentrotus purpuratus
XP_001193133.1
N
0.722
XP_001180223.1
Strongylocentrotus purpuratus
XP_001180223.1
N
0.722
mgf026587m
Mimulus guttatus
mgf026587m
N
0.722
mgf024003m
Mimulus guttatus
mgf024003m
N
0.722