CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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mgf026587m
(
Mimulus guttatus
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
mgf026587m
T14673_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf026587m
CCHC ZF
292
309
ELCFRCKKPGHKARDCPN
Links
Other
CCHC ZF
family RBPs
Other
Mimulus guttatus
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
mgf024003m
Mimulus guttatus
mgf024003m
N
1.000
mgf025561m
Mimulus guttatus
mgf025561m
N
0.722
mgf023481m
Mimulus guttatus
mgf023481m
N
0.722
mgf019161m
Mimulus guttatus
mgf019161m
N
0.722
e_gww2.1.919.1
Phanerochaete chrysosporium
e_gww2.1.919.1
N
0.722