estExt_fgenesh2_pg.C_220164 (Branchiostoma floridae)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 estExt_fgenesh2_pg.C_220164 T13615_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_pg.C_220164 CCHC ZF 166 182

Links

Other CCHC ZF family RBPs
Other Branchiostoma floridae RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw.4.464.1 Branchiostoma floridae e_gw.4.464.1 N 0.941
UM00321 Ustilago maydis UM00321 N 0.765
EIN_288500 Entamoeba invadens EIN_288500 N 0.765
CPIJ014636 Culex quinquefasciatus CPIJ014636 N 0.722
CpipJ_CPIJ014636 Culex pipiens CpipJ_CPIJ014636 N 0.722
estExt_Genewise1Plus.C_70072 Volvox carteri estExt_Genewise1Plus.C_70072 N 0.722
XP_002162513.1 Hydra magnipapillata XP_002162513.1 N 0.706
estExt_Genewise1Plus.C_1270035 Capitella teleta estExt_Genewise1Plus.C_1270035 N 0.706