CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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EIN_288500
(
Entamoeba invadens
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
EIN_288500
T12997_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
EIN_288500
CCHC ZF
125
141
ICRRCGKPGHFIRDCPE
Links
Other
CCHC ZF
family RBPs
Other
Entamoeba invadens
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
EHI_014000
Entamoeba histolytica
EHI_014000
N
0.765
EDI_353070
Entamoeba dispar
EDI_353070
N
0.765
estExt_fgenesh2_pg.C_220164
Branchiostoma floridae
estExt_fgenesh2_pg.C_220164
N
0.765
e_gw.4.464.1
Branchiostoma floridae
e_gw.4.464.1
N
0.765
estExtDG_Genemark1.C_1080017
Emiliania huxleyi
estExtDG_Genemark1.C_1080017
N
0.706
UM00321
Ustilago maydis
UM00321
N
0.706