fgenesh1_pg.C_scaffold_2229000001 (Capitella teleta)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 fgenesh1_pg.C_scaffold_2229000001 T13858_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_2229000001 CCHC ZF 308 324

Links

Other CCHC ZF family RBPs
Other Capitella teleta RBPs

6 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pg.C_scaffold_3158000001 Capitella teleta fgenesh1_pg.C_scaffold_3158000001 N 0.941
fgenesh1_pg.C_scaffold_836000001 Capitella teleta fgenesh1_pg.C_scaffold_836000001 N 0.765
fgenesh1_pg.C_scaffold_642000003 Capitella teleta fgenesh1_pg.C_scaffold_642000003 N 0.765
fgenesh1_pg.C_scaffold_6026000001 Capitella teleta fgenesh1_pg.C_scaffold_6026000001 N 0.722
fgenesh1_pg.C_scaffold_11925000001 Capitella teleta fgenesh1_pg.C_scaffold_11925000001 N 0.722
e_gw.4.464.1 Branchiostoma floridae e_gw.4.464.1 N 0.706