fgenesh1_pg.C_scaffold_642000003 (Capitella teleta)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 fgenesh1_pg.C_scaffold_642000003 T14021_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_642000003 CCHC ZF 227 243

Links

Other CCHC ZF family RBPs
Other Capitella teleta RBPs

20 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pg.C_scaffold_836000001 Capitella teleta fgenesh1_pg.C_scaffold_836000001 N 1.000
fgenesh1_pg.C_scaffold_11925000001 Capitella teleta fgenesh1_pg.C_scaffold_11925000001 N 0.944
fgenesh1_pg.C_scaffold_6026000001 Capitella teleta fgenesh1_pg.C_scaffold_6026000001 N 0.944
fgenesh1_pg.C_scaffold_3158000001 Capitella teleta fgenesh1_pg.C_scaffold_3158000001 N 0.824
fgenesh1_pg.C_scaffold_2229000001 Capitella teleta fgenesh1_pg.C_scaffold_2229000001 N 0.765
fgenesh1_pg.C_scaffold_386000003 Daphnia pulex fgenesh1_pg.C_scaffold_386000003 N 0.722
fgenesh1_pg.C_scaffold_140000007 Daphnia pulex fgenesh1_pg.C_scaffold_140000007 N 0.722
fgenesh1_pg.C_scaffold_205000008 Daphnia pulex fgenesh1_pg.C_scaffold_205000008 N 0.722
fgenesh1_pg.C_scaffold_33000112 Daphnia pulex fgenesh1_pg.C_scaffold_33000112 N 0.722
nasonia_NCBI_hmm196254 Nasonia vitripennis nasonia_NCBI_hmm196254 N 0.722
SNAP_00029977 Daphnia pulex SNAP_00029977 N 0.722
SNAP_00026457 Daphnia pulex SNAP_00026457 N 0.722
SNAP_00020521 Daphnia pulex SNAP_00020521 N 0.722
NCBI_GNO_456000001 Daphnia pulex NCBI_GNO_456000001 N 0.722
SNAP_00031168 Daphnia pulex SNAP_00031168 N 0.722
SNAP_00037736 Daphnia pulex SNAP_00037736 N 0.722
BGIBMGA012989 Bombyx mori BGIBMGA012989 N 0.722
SNAP_00038773 Daphnia pulex SNAP_00038773 N 0.722
fgenesh1_pg.C_scaffold_169000020 Daphnia pulex fgenesh1_pg.C_scaffold_169000020 N 0.706
CJA12564 Caenorhabditis japonica CJA12564 N 0.706