fgenesh1_pg.C_scaffold_40000002 (Phanerochaete chrysosporium)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 fgenesh1_pg.C_scaffold_40000002 T13948_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_40000002 CCHC ZF 401 418

Links

Other CCHC ZF family RBPs
Other Phanerochaete chrysosporium RBPs

12 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pg.C_scaffold_17000047 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_17000047 N 0.944
fgenesh1_pg.C_scaffold_2000895 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_2000895 N 0.833
fgenesh1_pg.C_scaffold_12000137 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_12000137 N 0.778
fgenesh1_pg.C_scaffold_13000007 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_13000007 N 0.778
fgenesh1_pg.C_scaffold_1000837 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_1000837 N 0.722
SNAPOd2T00025723001 Oikopleura dioica SNAPOd2T00025723001 N 0.722
SNAPOd2T00014479001 Oikopleura dioica SNAPOd2T00014479001 N 0.722
CJA08906 Caenorhabditis japonica CJA08906 N 0.722
CJA16947 Caenorhabditis japonica CJA16947 N 0.722
CJA24964 Caenorhabditis japonica CJA24964 N 0.722
CJA29014 Caenorhabditis japonica CJA29014 N 0.722
nasonia_NCBI_hmm129024 Nasonia vitripennis nasonia_NCBI_hmm129024 N 0.722