fgenesh1_pg.C_scaffold_6960000001 (Capitella teleta)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 fgenesh1_pg.C_scaffold_6960000001 T14029_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_6960000001 CCHC ZF 273 290

Links

Other CCHC ZF family RBPs
Other Capitella teleta RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pg.C_scaffold_159000006 Capitella teleta fgenesh1_pg.C_scaffold_159000006 N 1.000
fgenesh1_pg.C_scaffold_3542000001 Capitella teleta fgenesh1_pg.C_scaffold_3542000001 N 1.000
fgenesh1_pg.C_scaffold_15651000001 Capitella teleta fgenesh1_pg.C_scaffold_15651000001 N 1.000
fgenesh1_pg.C_scaffold_100000022 Capitella teleta fgenesh1_pg.C_scaffold_100000022 N 1.000
fgenesh1_pg.C_scaffold_17378000001 Capitella teleta fgenesh1_pg.C_scaffold_17378000001 N 0.944
fgeneshDP_pg.C_scaffold_142000005 Dictyostelium purpureum fgeneshDP_pg.C_scaffold_142000005 N 0.722
fgeneshDP_pg.C_scaffold_168000017 Dictyostelium purpureum fgeneshDP_pg.C_scaffold_168000017 N 0.722
fgenesh1_pg.C_scaffold_9000406 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_9000406 N 0.722