fgenesh2_pg.3_#_606 (Fragilariopsis cylindrus)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 fgenesh2_pg.3_#_606 T14156_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.3_#_606 CCHC ZF 386 403

Links

Other CCHC ZF family RBPs
Other Fragilariopsis cylindrus RBPs

5 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh2_pg.3_#_1108 Fragilariopsis cylindrus fgenesh2_pg.3_#_1108 N 0.833
fgenesh2_pg.15_#_75 Fragilariopsis cylindrus fgenesh2_pg.15_#_75 N 0.778
fgenesh2_pg.1_#_124 Fragilariopsis cylindrus fgenesh2_pg.1_#_124 N 0.778
XM_002874266.1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002106 N 0.722
emb1138 Arabidopsis thaliana AT5G26742-TAIR-G N 0.722