IGS.gm_1_00187 (Chlorella NC64A)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 IGS.gm_1_00187 T14618_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
IGS.gm_1_00187 CCHC ZF 222 239

Links

Other CCHC ZF family RBPs
Other Chlorella NC64A RBPs

24 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh3_pg.C_scaffold_13000017 Chlorella NC64A fgenesh3_pg.C_scaffold_13000017 N 1.000
IGS.gm_13_00027 Chlorella NC64A IGS.gm_13_00027 N 1.000
fgenesh2_pg.C_scaffold_18000055 Heterobasidion annosum fgenesh2_pg.C_scaffold_18000055 N 0.722
fgenesh2_pg.C_scaffold_15000101 Heterobasidion annosum fgenesh2_pg.C_scaffold_15000101 N 0.722
fgenesh2_pg.C_scaffold_14000029 Heterobasidion annosum fgenesh2_pg.C_scaffold_14000029 N 0.722
fgenesh2_pg.C_scaffold_3000140 Heterobasidion annosum fgenesh2_pg.C_scaffold_3000140 N 0.722
Genemark.5117_g Heterobasidion annosum Genemark.5117_g N 0.722
fgenesh2_pg.3_#_1108 Fragilariopsis cylindrus fgenesh2_pg.3_#_1108 N 0.722
LELG_05426 Lodderomyces elongisporus LELG_05426 N 0.722
Genemark.7683_g Heterobasidion annosum Genemark.7683_g N 0.722
EuGene8000286 Heterobasidion annosum EuGene8000286 N 0.722
fgenesh2_pg.C_scaffold_5000364 Heterobasidion annosum fgenesh2_pg.C_scaffold_5000364 N 0.722
EuGene5000232 Heterobasidion annosum EuGene5000232 N 0.722
EuGene15000010 Heterobasidion annosum EuGene15000010 N 0.722
EuGene1000075 Heterobasidion annosum EuGene1000075 N 0.722
EuGene1000054 Heterobasidion annosum EuGene1000054 N 0.722
e_gw1.10.905.1 Heterobasidion annosum e_gw1.10.905.1 N 0.722
EuGene2000035 Heterobasidion annosum EuGene2000035 N 0.722
EuGene2000565 Heterobasidion annosum EuGene2000565 N 0.722
EuGene5000105 Heterobasidion annosum EuGene5000105 N 0.722
EuGene5000059 Heterobasidion annosum EuGene5000059 N 0.722
EuGene5000027 Heterobasidion annosum EuGene5000027 N 0.722
EuGene2001100 Heterobasidion annosum EuGene2001100 N 0.722
EuGene8000075 Heterobasidion annosum EuGene8000075 N 0.722